Papers from the Bio/V lab on Bioinformatics Visualization

• IMAS_VDA09_Synteny.pdf (282K)
  Visualizing Conserved Gene Location across Microbe Genomes,
  Chris D. Shaw
  Proceedings of VDA 2009 Conference on Visualization and Data Analysis 2009 , San Jose, California, January 19-22, 2009, pp. 724306.1 - 724306.10 (10 pages).

• ShawCD-GenomicSpringSynteny-IVbm08.pdf (475K)
  Genomic Spring-Synteny Visualization with IMAS,
  Chris D. Shaw
  Proceedings of MediViz08, 5th IEEE International Conference BioMedical Visualization, London, England, July 9-11, 2008, pp. 3-8.

• IMAS_VAST.pdf (677K)
  IMAS: The Interactive Multigenomic Analysis System,
  Chris D. Shaw, Gregory A. Dasch, and Marina E. Eremeeva,
  IEEE Symposium on Visual Analytics Science and Technology 2007 (VAST), Sacramento, CA, Oct 30-Nov 1, 2007, pp 59-66.

• RickettsialEvNYAS05.pdf (70K)
  New Perspectives on Rickettsial Evolution from New Genome Sequences of Rickettsia, particularly R. canadensis, and Orientia tsutsugamushi,,
  Marina E. Eremeeva, Anup Madan, Chris D. Shaw, Kevin Tang, and Gregory A. Dasch,
  Annals of the New York Academy of Sciences, Vol 1063, pp 47-63 (2005).

• GVis_EuroVis05.pdf (248K)
  GVis: A Scalable Visualization Framework for Genomic Data,
  Jin Hong, Dong Hyun Jeong, Chris D Shaw, William Ribarsky, Mark Borodovsky, and Chang Song
  EUROVIS 2005: Eurographics / IEEE VGTC Symposium on Visualization 2005 June, 2005, Leeds, UK.
  pages 191-198, 2005.